Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative integral membrane protein | PMI12_02495 | Not Available | Positive | 2609044 - 2609502 | 16428.8 |
| dihydrofolate reductase | PMI12_02496 | Not Available | Negative | 2609528 - 2610163 | 22317.6 |
| peroxiredoxin, ohr subfamily | PMI12_02497 | Not Available | Negative | 2610274 - 2610687 | 14334.0 |
| hypothetical protein | PMI12_02498 | Not Available | Negative | 2610744 - 2611172 | 14192.8 |
| lactoylglutathione lyase-like lyase | PMI12_02499 | Not Available | Negative | 2611365 - 2611793 | 15361.5 |
| putative acyl-coa transferase/carnitine dehydratase | PMI12_02500 | Not Available | Negative | 2611804 - 2613048 | 43975.6 |
| acyl-coa dehydrogenase | PMI12_02501 | Not Available | Negative | 2613164 - 2614363 | 43306.1 |
| transcriptional regulator | PMI12_02502 | Not Available | Positive | 2614551 - 2615471 | 33451.4 |
| hypothetical protein | PMI12_02503 | Not Available | Negative | 2615416 - 2616213 | 29279.5 |
| hypothetical protein | PMI12_02504 | Not Available | Negative | 2616210 - 2616512 | 10749.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
