Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetaldehyde dehydrogenase (acetylating) | PMI12_02485 | Not Available | Positive | 2598610 - 2599566 | 33581.9 |
| 4-hydroxy-2-oxovalerate aldolase | PMI12_02486 | Not Available | Positive | 2599563 - 2600726 | 41682.5 |
| hypothetical protein | PMI12_02487 | Not Available | Positive | 2600958 - 2601113 | 5874.08 |
| inositol monophosphatase/fructose-1,6-bisphosphatase family protein | PMI12_02488 | Not Available | Positive | 2602224 - 2603249 | 36207.0 |
| zn-dependent oxidoreductase, nadph:quinone reductase | PMI12_02489 | Not Available | Positive | 2603404 - 2604411 | 35393.2 |
| cupin domain-containing protein | PMI12_02490 | Not Available | Positive | 2604430 - 2604786 | 13115.7 |
| hypothetical protein | PMI12_02491 | Not Available | Positive | 2604846 - 2605835 | 34249.4 |
| putative tim-barrel fold metal-dependent hydrolase | PMI12_02492 | Not Available | Positive | 2605837 - 2607513 | 59866.1 |
| uracil-dna glycosylase | PMI12_02493 | Not Available | Negative | 2607459 - 2608094 | 23318.2 |
| pep phosphonomutase-like enzyme | PMI12_02494 | Not Available | Negative | 2608100 - 2608930 | 28918.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
