Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotransferase family protein | PMI12_02475 | Not Available | Positive | 2589555 - 2590559 | 36318.6 |
| lactate dehydrogenase-like oxidoreductase | PMI12_02476 | Not Available | Negative | 2590585 - 2591550 | 34084.8 |
| transcriptional regulator | PMI12_02477 | Not Available | Negative | 2591572 - 2592618 | 37498.2 |
| hypothetical protein | PMI12_02478 | Not Available | Positive | 2592835 - 2594124 | 44353.1 |
| transcriptional regulator | PMI12_02479 | Not Available | Negative | 2594121 - 2595053 | 33105.3 |
| hypothetical protein | PMI12_02480 | Not Available | Positive | 2595143 - 2596120 | 33872.3 |
| hypothetical protein, possibly involved in utilization of glycolate and propanediol | PMI12_02481 | Not Available | Positive | 2596149 - 2596673 | 18663.3 |
| 2-keto-4-pentenoate hydratase | PMI12_02482 | Not Available | Positive | 2596759 - 2597574 | 28526.6 |
| 2-keto-4-pentenoate hydratase | PMI12_02483 | Not Available | Positive | 2597571 - 2598338 | 27143.5 |
| 4-oxalocrotonate tautomerase family enzyme | PMI12_02484 | Not Available | Positive | 2598342 - 2598596 | 9147.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
