Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc-type transport system, permease component | PMI12_02465 | Not Available | Positive | 2579697 - 2580545 | 29444.9 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_02466 | Not Available | Positive | 2580536 - 2582308 | 61165.4 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_02467 | Not Available | Positive | 2582298 - 2583005 | 25479.2 |
| hypothetical protein | PMI12_02468 | Not Available | Positive | 2582995 - 2583606 | 21602.4 |
| phosphopyruvate hydratase | PMI12_02469 | Not Available | Positive | 2583599 - 2584891 | 45319.7 |
| putative flavoprotein | PMI12_02470 | Not Available | Positive | 2584929 - 2585510 | 20053.2 |
| lactoylglutathione lyase-like lyase | PMI12_02471 | Not Available | Positive | 2585563 - 2586570 | 37449.5 |
| hypothetical protein | PMI12_02472 | Not Available | Positive | 2586591 - 2587121 | 19390.1 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_02473 | Not Available | Positive | 2587186 - 2588409 | 43483.3 |
| zn-dependent alcohol dehydrogenase | PMI12_02474 | Not Available | Positive | 2588431 - 2589558 | 40135.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
