Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanyl-trna synthetase, alpha subunit | PMI12_02455 | Not Available | Positive | 2569649 - 2570725 | 39837.2 |
| phenylalanyl-trna synthetase, beta subunit | PMI12_02456 | Not Available | Positive | 2570766 - 2573207 | 88141.2 |
| bacterial nucleoid dna-binding protein | PMI12_02457 | Not Available | Positive | 2573204 - 2573584 | 13721.3 |
| putative transcriptional regulator | PMI12_02458 | Not Available | Positive | 2573649 - 2574107 | 17768.5 |
| Trna-pro | Not Available | Not Available | Positive | 2574134 - 2574210 | Not Available |
| transposase | PMI12_02460 | Not Available | Positive | 2574329 - 2575867 | 58507.4 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_02461 | Not Available | Negative | 2575920 - 2576324 | 13921.5 |
| transcriptional regulator | PMI12_02462 | Not Available | Positive | 2576534 - 2577406 | 31904.7 |
| lysophospholipase | PMI12_02463 | Not Available | Positive | 2577536 - 2578600 | 36750.2 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase | PMI12_02464 | Not Available | Negative | 2578683 - 2579477 | 28065.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
