Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_02445 | Not Available | Negative | 2560305 - 2561270 | 33505.5 |
| transcriptional regulator | PMI12_02446 | Not Available | Negative | 2561414 - 2562070 | 25030.1 |
| swib domain-containing protein possibly involved in chromatin remodeling | PMI12_02447 | Not Available | Negative | 2562326 - 2562769 | 15171.0 |
| putative permease, dmt superfamily | PMI12_02448 | Not Available | Negative | 2562925 - 2563815 | 31476.6 |
| hypothetical protein | PMI12_02449 | Not Available | Positive | 2563887 - 2564300 | 15094.0 |
| isocitrate lyase | PMI12_02450 | Not Available | Positive | 2564506 - 2565837 | 48701.3 |
| threonyl-trna synthetase | PMI12_02451 | Not Available | Positive | 2566162 - 2568069 | 72396.5 |
| translation initiation factor if-3 | PMI12_02452 | Not Available | Positive | 2568297 - 2568794 | 18221.3 |
| ribosomal protein l35 | PMI12_02453 | Not Available | Positive | 2568949 - 2569152 | 7482.51 |
| ribosomal protein l20 | PMI12_02454 | Not Available | Positive | 2569177 - 2569536 | 13406.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
