Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_02435 | Not Available | Negative | 2547994 - 2549667 | 60420.9 |
| rna polymerase-binding protein dksa | PMI12_02436 | Not Available | Negative | 2549717 - 2550343 | 22991.4 |
| hypothetical protein | PMI12_02437 | Not Available | Positive | 2551030 - 2552571 | 53596.2 |
| sugar phosphate isomerase/epimerase | PMI12_02438 | Not Available | Negative | 2552795 - 2553673 | 32107.4 |
| protein of unknown function (duf993) | PMI12_02439 | Not Available | Negative | 2553682 - 2554869 | 42551.3 |
| putative dehydrogenase | PMI12_02440 | Not Available | Negative | 2554880 - 2556043 | 43584.3 |
| hypothetical protein | PMI12_02441 | Not Available | Negative | 2556086 - 2557516 | 51675.4 |
| abc-type nitrate/sulfonate/bicarbonate transport system, atpase component | PMI12_02442 | Not Available | Negative | 2557528 - 2558307 | 28399.0 |
| abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | PMI12_02443 | Not Available | Negative | 2558464 - 2559465 | 35820.4 |
| abc-type nitrate/sulfonate/bicarbonate transport system, permease component | PMI12_02444 | Not Available | Negative | 2559504 - 2560286 | 28474.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
