Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoylalanine--d-glutamate ligase | PMI12_02425 | Not Available | Negative | 2536037 - 2538124 | 72747.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | PMI12_02426 | Not Available | Negative | 2538132 - 2539310 | 43543.5 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | PMI12_02427 | Not Available | Negative | 2539326 - 2540762 | 50300.0 |
| udp-n-acetylmuramyl-tripeptide synthetase | PMI12_02428 | Not Available | Negative | 2540759 - 2542318 | 54186.6 |
| cell division protein ftsi/penicillin-binding protein 2 | PMI12_02429 | Not Available | Negative | 2542321 - 2544075 | 63819.9 |
| cell division protein ftsl | PMI12_02430 | Not Available | Negative | 2544072 - 2544428 | 13124.1 |
| s-adenosyl-methyltransferase mraw | PMI12_02431 | Not Available | Negative | 2544430 - 2545353 | 33735.2 |
| hypothetical protein | PMI12_02432 | Not Available | Negative | 2545362 - 2545658 | 11267.5 |
| atp-dependent protease hslvu, atpase subunit | PMI12_02433 | Not Available | Negative | 2546062 - 2547390 | 49003.8 |
| atp-dependent protease hslvu, peptidase subunit | PMI12_02434 | Not Available | Negative | 2547393 - 2547938 | 19416.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
