Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose efflux permease family protein | PMI12_02405 | Not Available | Negative | 2509177 - 2510379 | 41289.8 |
| dna-binding domain-containing protein, arac-type | PMI12_02406 | Not Available | Positive | 2510661 - 2511599 | 33686.9 |
| hypothetical protein | PMI12_02407 | Not Available | Positive | 2511748 - 2512038 | 10371.3 |
| protein of unknown function (duf1311) | PMI12_02408 | Not Available | Positive | 2512883 - 2513338 | 16003.2 |
| hypothetical protein | PMI12_02409 | Not Available | Negative | 2513384 - 2513890 | 18509.0 |
| rhs element vgr protein | PMI12_02410 | Not Available | Positive | 2514308 - 2517238 | 105045.0 |
| rhs family protein | PMI12_02411 | Not Available | Positive | 2517291 - 2521088 | 139463.0 |
| hypothetical protein | PMI12_02412 | Not Available | Negative | 2521196 - 2523271 | 75805.6 |
| crossover junction endodeoxyribonuclease ruvc | PMI12_02413 | Not Available | Positive | 2523419 - 2523967 | 19055.0 |
| glycine/serine hydroxymethyltransferase | PMI12_02414 | Not Available | Negative | 2523969 - 2525291 | 45895.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
