Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf3311) | PMI12_02395 | Not Available | Positive | 2501022 - 2501237 | 7529.27 |
| na+/proline symporter | PMI12_02396 | Not Available | Positive | 2501234 - 2502709 | 52152.1 |
| cytosine deaminase-like metal-dependent hydrolase | PMI12_02397 | Not Available | Positive | 2502745 - 2503947 | 42448.4 |
| cyanate permease | PMI12_02398 | Not Available | Positive | 2503944 - 2505224 | 44055.6 |
| cytosine/adenosine deaminase | PMI12_02399 | Not Available | Positive | 2505230 - 2505724 | 17460.7 |
| hypothetical protein | PMI12_02400 | Not Available | Positive | 2505909 - 2506163 | 9170.06 |
| enterochelin esterase-like enzyme | PMI12_02401 | Not Available | Negative | 2506223 - 2507062 | 29749.7 |
| hypothetical protein | PMI12_02402 | Not Available | Positive | 2507317 - 2507841 | 19403.0 |
| hypothetical protein | PMI12_02403 | Not Available | Negative | 2507856 - 2508170 | 11426.6 |
| aldo/keto reductase, diketogulonate reductase | PMI12_02404 | Not Available | Negative | 2508321 - 2509139 | 29191.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
