Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb-like partition protein | PMI12_02385 | Not Available | Positive | 2485176 - 2485832 | 24151.2 |
| hypothetical protein | PMI12_02386 | Not Available | Positive | 2485829 - 2486149 | 11503.9 |
| outer membrane protein | PMI12_02387 | Not Available | Negative | 2486276 - 2487787 | 52302.1 |
| type i secretion membrane fusion protein, hlyd family | PMI12_02388 | Not Available | Negative | 2487765 - 2489132 | 49684.0 |
| type i secretion system abc transporter, hlyb family | PMI12_02389 | Not Available | Negative | 2489129 - 2491297 | 79023.2 |
| hypothetical protein | PMI12_02390 | Not Available | Negative | 2491421 - 2492768 | 46420.1 |
| amino acid adenylation enzyme/thioester reductase family protein | PMI12_02391 | Not Available | Negative | 2492769 - 2498900 | 218185.0 |
| hypothetical protein | PMI12_02392 | Not Available | Negative | 2498902 - 2499006 | 3696.82 |
| dmt(drug/metabolite transporter) superfamily permease | PMI12_02393 | Not Available | Negative | 2499056 - 2500006 | 32871.4 |
| transcriptional regulator | PMI12_02394 | Not Available | Negative | 2500070 - 2500855 | 28228.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
