Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative permease | PMI12_02355 | Not Available | Positive | 2451928 - 2453049 | 41270.6 |
| putative permease | PMI12_02356 | Not Available | Positive | 2453046 - 2454155 | 41436.7 |
| hypothetical protein | PMI12_02357 | Not Available | Positive | 2454152 - 2454514 | 13174.1 |
| transcriptional regulator | PMI12_02358 | Not Available | Positive | 2454578 - 2455519 | 34971.2 |
| aspartate/tyrosine/aromatic aminotransferase | PMI12_02359 | Not Available | Positive | 2455516 - 2456688 | 42450.1 |
| protein of unknown function (duf3309) | PMI12_02360 | Not Available | Positive | 2456844 - 2457002 | 5555.34 |
| atp-dependent helicase hrpa | PMI12_02361 | Not Available | Negative | 2457063 - 2460842 | 141103.0 |
| atp-dependent zn protease | PMI12_02362 | Not Available | Positive | 2461287 - 2463272 | 73129.0 |
| amino-acid n-acetyltransferase | PMI12_02363 | Not Available | Positive | 2463322 - 2464668 | 49433.5 |
| putative threonine efflux protein | PMI12_02364 | Not Available | Positive | 2464705 - 2465346 | 22265.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
