Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine/lysine/ornithine decarboxylase | PMI12_02345 | Not Available | Negative | 2443071 - 2445359 | 85944.7 |
| membrane protein implicated in regulation of membrane protease activity | PMI12_02346 | Not Available | Positive | 2445576 - 2446001 | 14894.0 |
| membrane protease subunit, stomatin/prohibitin | PMI12_02347 | Not Available | Positive | 2446038 - 2446967 | 33600.6 |
| Trna-ser | Not Available | Not Available | Positive | 2446993 - 2447083 | Not Available |
| hypothetical protein | PMI12_02349 | Not Available | Positive | 2447281 - 2447637 | 12888.0 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_02350 | Not Available | Positive | 2447737 - 2448126 | 14190.1 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_02351 | Not Available | Negative | 2448216 - 2449421 | 41621.9 |
| hypothetical protein | PMI12_02352 | Not Available | Negative | 2449558 - 2449953 | 13907.7 |
| dna polymerase iii, chi subunit | PMI12_02353 | Not Available | Negative | 2449955 - 2450395 | 16142.2 |
| leucyl aminopeptidase | PMI12_02354 | Not Available | Negative | 2450392 - 2451906 | 51564.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
