Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-2 | PMI12_02335 | Not Available | Negative | 2429127 - 2432114 | 105687.0 |
| transcription termination factor nusa | PMI12_02336 | Not Available | Negative | 2432139 - 2433632 | 55153.6 |
| hypothetical protein | PMI12_02337 | Not Available | Negative | 2433649 - 2434290 | 23069.5 |
| sugar phosphate permease | PMI12_02338 | Not Available | Negative | 2434492 - 2435694 | 41116.0 |
| abc-type uncharacterized transport system, duplicated atpase component | PMI12_02339 | Not Available | Negative | 2435711 - 2437348 | 58888.9 |
| abc-type uncharacterized transport system, permease component | PMI12_02340 | Not Available | Negative | 2437345 - 2438340 | 36734.1 |
| abc-type uncharacterized transport system, permease component | PMI12_02341 | Not Available | Negative | 2438435 - 2439475 | 38047.3 |
| abc-type oligopeptide transport system, periplasmic component | PMI12_02342 | Not Available | Negative | 2439494 - 2441308 | 68414.5 |
| enoyl-(acyl-carrier-protein) reductase nadh | PMI12_02343 | Not Available | Positive | 2441346 - 2442128 | 27431.8 |
| atp dependent dna ligase-like protein | PMI12_02344 | Not Available | Positive | 2442209 - 2443033 | 30512.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
