Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inosine-5''-monophosphate dehydrogenase | PMI12_02325 | Not Available | Negative | 2420867 - 2422336 | 51599.2 |
| hypothetical protein | PMI12_02326 | Not Available | Positive | 2422465 - 2422989 | 18516.0 |
| hypothetical protein | PMI12_02327 | Not Available | Negative | 2422997 - 2423335 | 12635.3 |
| oligoketide cyclase/lipid transport protein | PMI12_02328 | Not Available | Negative | 2423335 - 2423781 | 16495.7 |
| ssra-binding protein | PMI12_02329 | Not Available | Positive | 2423845 - 2424321 | 18104.0 |
| hypothetical protein | PMI12_02330 | Not Available | Positive | 2424500 - 2424895 | 13563.2 |
| putative permease | PMI12_02331 | Not Available | Negative | 2424997 - 2425914 | 32278.5 |
| gtp-binding protein typa/bipa | PMI12_02332 | Not Available | Negative | 2425940 - 2427778 | 67343.8 |
| trna pseudouridine 55 synthase | PMI12_02333 | Not Available | Negative | 2427775 - 2428731 | 34236.2 |
| ribosome-binding factor a | PMI12_02334 | Not Available | Negative | 2428734 - 2429105 | 13717.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
