Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative translation initiation inhibitor, yjgf family | PMI12_02315 | Not Available | Negative | 2413260 - 2413754 | 17426.9 |
| ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase | PMI12_02316 | Not Available | Negative | 2413841 - 2414161 | 11533.6 |
| small subunit of phenylpropionate dioxygenase | PMI12_02317 | Not Available | Negative | 2414170 - 2414652 | 18398.8 |
| ring-hydroxylating dioxygenase, large terminal subunit | PMI12_02318 | Not Available | Negative | 2414649 - 2415905 | 48244.3 |
| 2-polyprenylphenol hydroxylase-like oxidoreductase | PMI12_02319 | Not Available | Negative | 2415938 - 2416927 | 35691.2 |
| transcriptional regulator | PMI12_02320 | Not Available | Positive | 2417053 - 2417967 | 33400.7 |
| hypothetical protein | PMI12_02321 | Not Available | Positive | 2418038 - 2418412 | 13722.6 |
| gmp synthase (glutamine-hydrolyzing) | PMI12_02322 | Not Available | Negative | 2418478 - 2420097 | 59139.2 |
| putative nucleic acid-binding protein, contains pin domain containing protein | PMI12_02323 | Not Available | Negative | 2420110 - 2420529 | 15236.2 |
| prevent-host-death family protein | PMI12_02324 | Not Available | Negative | 2420541 - 2420789 | 9168.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
