Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_02285 | Not Available | Negative | 2384280 - 2384591 | 10910.6 |
| hypothetical protein | PMI12_02286 | Not Available | Positive | 2384831 - 2385043 | 7831.86 |
| alkylated dna repair protein | PMI12_02287 | Not Available | Negative | 2385053 - 2385703 | 24189.2 |
| dna helicase, rad3 | PMI12_02288 | Not Available | Negative | 2385660 - 2387987 | 86115.1 |
| signal transduction histidine kinase | PMI12_02289 | Not Available | Positive | 2388130 - 2391639 | 129018.0 |
| methylase of chemotaxis methyl-accepting protein | PMI12_02290 | Not Available | Positive | 2391636 - 2392505 | 32642.0 |
| chemotaxis response regulator containing a chey-like receiver domain and a methylesterase domain | PMI12_02291 | Not Available | Positive | 2392502 - 2393107 | 21557.2 |
| signal transduction histidine kinase | PMI12_02292 | Not Available | Positive | 2393097 - 2394311 | 45082.7 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_02293 | Not Available | Positive | 2394328 - 2394684 | 12404.7 |
| transcriptional regulator | PMI12_02294 | Not Available | Positive | 2394765 - 2395496 | 26759.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
