Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | PMI12_02265 | Not Available | Positive | 2361326 - 2362264 | 34119.1 |
| hypothetical protein | PMI12_02266 | Not Available | Positive | 2362366 - 2362572 | 7533.96 |
| protein-tyrosine-phosphatase | PMI12_02267 | Not Available | Negative | 2362609 - 2363103 | 18036.7 |
| acyl-coa synthetase (ndp forming) | PMI12_02268 | Not Available | Positive | 2363189 - 2365888 | 96438.5 |
| flavin-dependent oxidoreductase, methylene-tetrahydromethanopterin reductase | PMI12_02269 | Not Available | Negative | 2366026 - 2367033 | 36948.9 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_02270 | Not Available | Negative | 2367030 - 2367974 | 33781.4 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_02271 | Not Available | Negative | 2367984 - 2368901 | 32904.1 |
| abc-type polar amino acid transport system, atpase component | PMI12_02272 | Not Available | Negative | 2368939 - 2370774 | 66294.2 |
| acetyltransferase, n-acetylglutamate synthase | PMI12_02273 | Not Available | Negative | 2370771 - 2371346 | 21636.7 |
| fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase family | PMI12_02274 | Not Available | Negative | 2371346 - 2372686 | 48747.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
