Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein involved in the export of o-antigen and teichoic acid | PMI12_02255 | Not Available | Positive | 2351019 - 2352278 | 45011.6 |
| glycosyltransferase | PMI12_02256 | Not Available | Positive | 2352275 - 2353522 | 45596.2 |
| udp-glucose-4-epimerase | PMI12_02257 | Not Available | Positive | 2353553 - 2354662 | 39165.6 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_02258 | Not Available | Positive | 2354655 - 2355431 | 28091.8 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | PMI12_02259 | Not Available | Positive | 2355475 - 2356956 | 52662.0 |
| hypothetical protein | PMI12_02260 | Not Available | Negative | 2356983 - 2357585 | 21183.8 |
| transcriptional regulator with hth domain and aminotransferase domain containing protein | PMI12_02261 | Not Available | Positive | 2357681 - 2359015 | 47765.8 |
| hypothetical protein | PMI12_02262 | Not Available | Positive | 2359130 - 2359420 | 10237.1 |
| hypothetical protein | PMI12_02263 | Not Available | Positive | 2359474 - 2359821 | 12888.5 |
| putative amino acid aldolase or racemase | PMI12_02264 | Not Available | Negative | 2360120 - 2361253 | 40502.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
