Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hydrolase of the alpha/beta superfamily | PMI12_02245 | Not Available | Positive | 2339457 - 2340278 | 30414.1 |
| hypothetical protein | PMI12_02246 | Not Available | Positive | 2340271 - 2341200 | 33524.2 |
| periplasmic protein involved in polysaccharide export | PMI12_02247 | Not Available | Positive | 2341273 - 2342496 | 43060.0 |
| capsular exopolysaccharide biosynthesis protein | PMI12_02248 | Not Available | Positive | 2342584 - 2344860 | 81828.7 |
| glycosyl transferase possibly involved in lipopolysaccharide synthesis | PMI12_02249 | Not Available | Positive | 2344857 - 2345561 | 26498.9 |
| nucleoside-diphosphate-sugar epimerase | PMI12_02250 | Not Available | Positive | 2345646 - 2346611 | 35656.4 |
| hypothetical protein | PMI12_02251 | Not Available | Positive | 2346655 - 2347980 | 47363.6 |
| glycosyltransferase | PMI12_02252 | Not Available | Positive | 2347995 - 2349071 | 40781.3 |
| hypothetical protein | PMI12_02253 | Not Available | Positive | 2349068 - 2350021 | 34043.0 |
| hypothetical protein | PMI12_02254 | Not Available | Positive | 2350067 - 2351005 | 34708.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
