Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly protein, protease cpaa | PMI12_02235 | Not Available | Negative | 2318986 - 2319570 | 20130.4 |
| hypothetical protein | PMI12_02236 | Not Available | Negative | 2319587 - 2319733 | 5357.99 |
| hypothetical protein | PMI12_02237 | Not Available | Negative | 2319947 - 2322583 | 95200.3 |
| dna repair exonuclease | PMI12_02238 | Not Available | Negative | 2322580 - 2323707 | 40334.6 |
| hypothetical protein | PMI12_02239 | Not Available | Negative | 2323818 - 2324000 | 6734.27 |
| membrane-bound metallopeptidase | PMI12_02240 | Not Available | Negative | 2324105 - 2324833 | 25465.3 |
| methylase involved in ubiquinone/menaquinone biosynthesis | PMI12_02241 | Not Available | Negative | 2324933 - 2325817 | 32258.4 |
| amino acid adenylation enzyme/thioester reductase family protein | PMI12_02242 | Not Available | Positive | 2326369 - 2333691 | 258929.0 |
| amino acid adenylation enzyme/thioester reductase family protein | PMI12_02243 | Not Available | Positive | 2333688 - 2338685 | 182022.0 |
| phosphopantetheinyl transferase | PMI12_02244 | Not Available | Positive | 2338688 - 2339401 | 25579.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
