Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic protease | PMI12_02175 | Not Available | Negative | 2258272 - 2259888 | 55300.2 |
| aaa+ family atpase | PMI12_02176 | Not Available | Negative | 2259951 - 2262275 | 85739.3 |
| threonine dehydratase, medium form | PMI12_02177 | Not Available | Positive | 2262383 - 2263591 | 42545.8 |
| hypothetical protein | PMI12_02178 | Not Available | Positive | 2263711 - 2263863 | 5145.51 |
| phosphoenolpyruvate carboxykinase (gtp) | PMI12_02179 | Not Available | Positive | 2264016 - 2265887 | 68552.8 |
| universal stress protein uspa-like protein | PMI12_02180 | Not Available | Negative | 2266032 - 2266874 | 30068.7 |
| hypothetical protein | PMI12_02181 | Not Available | Negative | 2266874 - 2267251 | 13601.4 |
| phosphoketolase | PMI12_02182 | Not Available | Positive | 2267443 - 2269815 | 87623.5 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_02183 | Not Available | Positive | 2269919 - 2270647 | 26287.7 |
| pas domain s-box | PMI12_02184 | Not Available | Positive | 2270640 - 2272754 | 75853.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
