Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin | PMI12_02165 | Not Available | Negative | 2246993 - 2247844 | 31969.1 |
| urocanate hydratase | PMI12_02166 | Not Available | Negative | 2247844 - 2248569 | 26212.4 |
| hypothetical protein | PMI12_02167 | Not Available | Positive | 2248637 - 2249764 | 40423.8 |
| histidine ammonia-lyase | PMI12_02168 | Not Available | Negative | 2249598 - 2251160 | 53672.0 |
| histidine utilization repressor | PMI12_02169 | Not Available | Negative | 2251220 - 2251957 | 27665.1 |
| abc-type nitrate/sulfonate/bicarbonate transport system, atpase component | PMI12_02170 | Not Available | Negative | 2252133 - 2252927 | 29516.7 |
| abc-type nitrate/sulfonate/bicarbonate transport system, permease component | PMI12_02171 | Not Available | Negative | 2252912 - 2253790 | 31125.9 |
| abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | PMI12_02172 | Not Available | Negative | 2253771 - 2254742 | 34080.2 |
| atp-dependent dna helicase recq | PMI12_02173 | Not Available | Positive | 2254770 - 2256923 | 78377.0 |
| inosine-uridine nucleoside n-ribohydrolase | PMI12_02174 | Not Available | Negative | 2256927 - 2258117 | 41805.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
