Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sh3 type 3 domain protein | PMI12_02155 | Not Available | Negative | 2237384 - 2238103 | 25147.8 |
| cobalamin-dependent methionine synthase i | PMI12_02156 | Not Available | Negative | 2238176 - 2239231 | 37625.7 |
| histidinol-phosphate aminotransferase | PMI12_02157 | Not Available | Negative | 2239303 - 2240466 | 41077.5 |
| n-formylglutamate amidohydrolase | PMI12_02158 | Not Available | Negative | 2240546 - 2241367 | 29840.2 |
| formiminoglutamate deiminase | PMI12_02159 | Not Available | Negative | 2241374 - 2242756 | 49587.6 |
| imidazolonepropionase | PMI12_02160 | Not Available | Negative | 2242753 - 2244012 | 44205.1 |
| hypothetical protein | PMI12_02161 | Not Available | Negative | 2244028 - 2244600 | 20492.1 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_02162 | Not Available | Negative | 2244648 - 2245316 | 24180.5 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_02163 | Not Available | Negative | 2245324 - 2246076 | 27095.8 |
| transcriptional regulator | PMI12_02164 | Not Available | Negative | 2246128 - 2246862 | 26016.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
