Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_02144 | Not Available | Negative | 2225061 - 2226677 | 57248.6 |
| flavodoxin reductase family protein | PMI12_02145 | Not Available | Positive | 2227001 - 2227774 | 29240.2 |
| transcriptional regulator | PMI12_02146 | Not Available | Positive | 2227792 - 2228550 | 28234.3 |
| cytosine deaminase-like metal-dependent hydrolase | PMI12_02147 | Not Available | Positive | 2228496 - 2229695 | 41453.4 |
| putative membrane protein | PMI12_02148 | Not Available | Negative | 2229715 - 2230116 | 14299.5 |
| glycosyl transferase | PMI12_02149 | Not Available | Negative | 2230113 - 2231108 | 35850.6 |
| hypothetical protein | PMI12_02150 | Not Available | Negative | 2231105 - 2232916 | 66132.0 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | PMI12_02151 | Not Available | Negative | 2232969 - 2235740 | 101718.0 |
| putative membrane protein | PMI12_02153 | Not Available | Negative | 2235905 - 2236342 | 15761.5 |
| transcriptional regulator | PMI12_02154 | Not Available | Positive | 2236445 - 2237371 | 32932.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
