Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent aldehyde dehydrogenase | PMI12_02104 | Not Available | Negative | 2173689 - 2175143 | 51715.8 |
| transcriptional regulator | PMI12_02105 | Not Available | Positive | 2175292 - 2176251 | 35269.4 |
| hypothetical protein | PMI12_02106 | Not Available | Negative | 2176310 - 2176456 | 4657.57 |
| mg chelatase-related protein | PMI12_02107 | Not Available | Positive | 2176671 - 2178215 | 54327.9 |
| protein kinase family protein | PMI12_02108 | Not Available | Negative | 2178247 - 2180235 | 69985.7 |
| type vi secretion-associated protein, bma_a0400 family | PMI12_02109 | Not Available | Negative | 2180282 - 2180995 | 25963.6 |
| type vi secretion protein icmf | PMI12_02110 | Not Available | Negative | 2180997 - 2184662 | 135798.0 |
| type vi secretion system ompa/motb family protein | PMI12_02111 | Not Available | Negative | 2184662 - 2186071 | 50283.2 |
| type vi secretion protein, vc_a0114 family | PMI12_02112 | Not Available | Negative | 2186080 - 2187459 | 50903.3 |
| type vi secretion lipoprotein, vc_a0113 family | PMI12_02113 | Not Available | Negative | 2187630 - 2188058 | 15988.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
