Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | PMI12_02094 | Not Available | Positive | 2162098 - 2162580 | 16942.4 |
| dihydrodipicolinate synthase/n-acetylneuraminate lyase | PMI12_02095 | Not Available | Negative | 2162447 - 2163364 | 33622.7 |
| dihydroxyacid dehydratase/phosphogluconate dehydratase | PMI12_02096 | Not Available | Negative | 2163388 - 2165124 | 61929.5 |
| permease component of ribose/xylose/arabinose/galactoside abc-type transporters | PMI12_02097 | Not Available | Negative | 2165129 - 2166160 | 36136.1 |
| permease component of ribose/xylose/arabinose/galactoside abc-type transporters | PMI12_02098 | Not Available | Negative | 2166157 - 2167191 | 36080.4 |
| abc-type sugar transport system, atpase component | PMI12_02099 | Not Available | Negative | 2167309 - 2168832 | 54783.5 |
| abc-type xylose transport system, permease component | PMI12_02100 | Not Available | Negative | 2168839 - 2170050 | 42581.6 |
| abc-type sugar transport system, atpase component | PMI12_02101 | Not Available | Negative | 2170037 - 2171593 | 56539.9 |
| abc-type xylose transport system, periplasmic component | PMI12_02102 | Not Available | Negative | 2171590 - 2172660 | 38645.5 |
| abc-type sugar transport system, periplasmic component | PMI12_02103 | Not Available | Negative | 2172673 - 2173638 | 34876.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
