Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_02064 | Not Available | Positive | 2126426 - 2127001 | 21104.1 |
| 5''-nucleotidase | PMI12_02065 | Not Available | Positive | 2127017 - 2127916 | 33131.8 |
| hypothetical protein | PMI12_02066 | Not Available | Positive | 2128123 - 2128320 | 6368.77 |
| phospholipase c, phosphocholine-specific | PMI12_02067 | Not Available | Positive | 2128341 - 2130611 | 82431.2 |
| cytosine deaminase-like metal-dependent hydrolase | PMI12_02068 | Not Available | Positive | 2130632 - 2132026 | 49698.7 |
| lipoxygenase | PMI12_02069 | Not Available | Positive | 2132201 - 2134210 | 71713.1 |
| cytochrome c, mono- and diheme variants family | PMI12_02070 | Not Available | Negative | 2134229 - 2135512 | 45455.2 |
| cytochrome c553 | PMI12_02071 | Not Available | Negative | 2135526 - 2136242 | 25322.7 |
| protein of unknown function (duf2970) | PMI12_02072 | Not Available | Negative | 2136239 - 2136481 | 8595.99 |
| transcriptional regulator with hth domain and aminotransferase domain containing protein | PMI12_02073 | Not Available | Positive | 2136527 - 2137945 | 50959.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
