Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemagglutinin-like protein | PMI12_02054 | Not Available | Negative | 2110156 - 2115786 | 177694.0 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_02055 | Not Available | Positive | 2116093 - 2116830 | 28068.7 |
| hypothetical protein | PMI12_02056 | Not Available | Positive | 2116925 - 2118253 | 46752.7 |
| putative transmembrane sensor domain protein | PMI12_02057 | Not Available | Positive | 2118268 - 2120637 | 85576.8 |
| hypothetical protein | PMI12_02058 | Not Available | Negative | 2120651 - 2121085 | 14688.8 |
| fe-s oxidoreductase | PMI12_02059 | Not Available | Negative | 2121176 - 2122408 | 44433.8 |
| fad/fmn-dependent dehydrogenase | PMI12_02060 | Not Available | Negative | 2122422 - 2123531 | 39021.7 |
| hypothetical protein | PMI12_02061 | Not Available | Positive | 2123626 - 2123759 | 4586.55 |
| type ii secretory pathway, atpase pule/tfp pilus assembly pathway, atpase pilb | PMI12_02062 | Not Available | Positive | 2123759 - 2125156 | 50326.6 |
| general secretion pathway protein f | PMI12_02063 | Not Available | Positive | 2125171 - 2126409 | 43652.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
