Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_02044 | Not Available | Positive | 2101144 - 2102136 | 34513.7 |
| ribulose-5-phosphate 4-epimerase-like epimerase or aldolase | PMI12_02045 | Not Available | Positive | 2102155 - 2102946 | 28758.4 |
| ketopantoate reductase | PMI12_02046 | Not Available | Positive | 2102960 - 2103937 | 34235.8 |
| hypothetical protein | PMI12_02047 | Not Available | Negative | 2103995 - 2104717 | 25895.9 |
| alanine racemase | PMI12_02048 | Not Available | Negative | 2104714 - 2105823 | 40210.2 |
| major facilitator superfamily transporter | PMI12_02049 | Not Available | Positive | 2106006 - 2107310 | 46517.9 |
| putative permease | PMI12_02050 | Not Available | Positive | 2107423 - 2108316 | 31109.4 |
| glutathione peroxidase | PMI12_02051 | Not Available | Positive | 2108326 - 2108814 | 17443.8 |
| hypothetical protein | PMI12_02052 | Not Available | Negative | 2108819 - 2109271 | 16339.5 |
| outer membrane protein/peptidoglycan-associated lipoprotein | PMI12_02053 | Not Available | Negative | 2109275 - 2110135 | 31126.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
