Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type branched-chain amino acid transport system, atpase component | PMI12_02004 | Not Available | Positive | 2052488 - 2053195 | 25527.5 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_02005 | Not Available | Positive | 2053238 - 2054434 | 43042.6 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_02006 | Not Available | Positive | 2054570 - 2055445 | 31250.7 |
| abc-type branched-chain amino acid transport system, permease component | PMI12_02007 | Not Available | Positive | 2055456 - 2056054 | 21338.0 |
| hypothetical protein | PMI12_02008 | Not Available | Negative | 2056159 - 2058885 | 98222.0 |
| hypothetical protein | PMI12_02009 | Not Available | Negative | 2058957 - 2062469 | 130907.0 |
| dna internalization-related competence protein comec/rec2 | PMI12_02010 | Not Available | Positive | 2062611 - 2065052 | 87687.5 |
| hypothetical protein | PMI12_02011 | Not Available | Positive | 2065215 - 2066711 | 55718.0 |
| hypothetical protein | PMI12_02012 | Not Available | Positive | 2066726 - 2067682 | 36673.4 |
| hypothetical protein | PMI12_02013 | Not Available | Negative | 2067651 - 2068106 | 16619.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
