Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | PMI12_01994 | Not Available | Negative | 2040949 - 2041425 | 17499.6 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase | PMI12_01995 | Not Available | Negative | 2041669 - 2043300 | 60079.8 |
| transcriptional regulator | PMI12_01996 | Not Available | Negative | 2043348 - 2043794 | 17066.6 |
| hypothetical protein | PMI12_01997 | Not Available | Negative | 2044239 - 2044901 | 23148.6 |
| transcriptional regulator | PMI12_01998 | Not Available | Positive | 2044939 - 2045892 | 34872.9 |
| enoyl-coa hydratase/carnithine racemase | PMI12_01999 | Not Available | Negative | 2045995 - 2046774 | 27729.7 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI12_02000 | Not Available | Positive | 2047046 - 2048608 | 56727.6 |
| dna-binding domain-containing protein, arac-type | PMI12_02001 | Not Available | Positive | 2048723 - 2049715 | 36784.1 |
| acetyl-coa acetyltransferase | PMI12_02002 | Not Available | Positive | 2050362 - 2051546 | 41112.1 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_02003 | Not Available | Positive | 2051668 - 2052486 | 30184.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
