Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd family efflux transporter, mfp subunit | PMI12_01944 | Not Available | Positive | 1993557 - 1994792 | 42280.3 |
| cation/multidrug efflux pump | PMI12_01945 | Not Available | Positive | 1994789 - 1997947 | 112715.0 |
| hypothetical protein | PMI12_01946 | Not Available | Positive | 1997925 - 1998017 | 3211.82 |
| fructose-2,6-bisphosphatase | PMI12_01947 | Not Available | Negative | 1998014 - 1998658 | 23532.7 |
| hypothetical protein | PMI12_01948 | Not Available | Negative | 1998679 - 1999302 | 22499.3 |
| putative atpase of the pp-loop superfamily implicated in cell cycle control | PMI12_01949 | Not Available | Negative | 1999349 - 2000281 | 34683.9 |
| dihydroneopterin aldolase | PMI12_01950 | Not Available | Negative | 2000324 - 2000704 | 14192.5 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_01951 | Not Available | Negative | 2000713 - 2001495 | 27779.2 |
| hypothetical protein | PMI12_01952 | Not Available | Positive | 2001517 - 2002632 | 40394.0 |
| putative taurine catabolism dioxygenase | PMI12_01953 | Not Available | Positive | 2003314 - 2004204 | 33541.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
