Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s20 | PMI12_01884 | Not Available | Positive | 1928046 - 1928360 | 11201.7 |
| protein of unknown function (duf3579) | PMI12_01885 | Not Available | Negative | 1928508 - 1928831 | 11685.0 |
| acetylornithine/succinylornithine aminotransferase | PMI12_01886 | Not Available | Positive | 1928993 - 1930201 | 42896.1 |
| ornithine carbamoyltransferase | PMI12_01887 | Not Available | Positive | 1930198 - 1931163 | 35875.6 |
| putative fe-s oxidoreductase | PMI12_01888 | Not Available | Positive | 1931288 - 1931602 | 11099.1 |
| arylformamidase | PMI12_01889 | Not Available | Positive | 1931677 - 1932330 | 23976.8 |
| kynureninase | PMI12_01890 | Not Available | Positive | 1932287 - 1933618 | 48000.1 |
| hypothetical protein | PMI12_01891 | Not Available | Positive | 1933632 - 1934117 | 18039.6 |
| tryptophan 2,3-dioxygenase | PMI12_01892 | Not Available | Positive | 1934134 - 1934970 | 31938.4 |
| hypothetical protein | PMI12_01893 | Not Available | Positive | 1935070 - 1936308 | 43954.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
