Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf2796) | PMI12_01784 | Not Available | Positive | 1829244 - 1829843 | 21168.4 |
| abc-type antimicrobial peptide transport system, atpase component | PMI12_01785 | Not Available | Positive | 1829881 - 1830594 | 26139.4 |
| abc-type transport system, involved in lipoprotein release, permease component | PMI12_01786 | Not Available | Positive | 1830591 - 1831853 | 45016.3 |
| hypothetical protein | PMI12_01787 | Not Available | Positive | 1831857 - 1832492 | 22535.2 |
| small-conductance mechanosensitive channel | PMI12_01788 | Not Available | Positive | 1832660 - 1834639 | 73255.3 |
| acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase | PMI12_01789 | Not Available | Negative | 1834682 - 1835848 | 40868.3 |
| putative transcriptional regulator | PMI12_01790 | Not Available | Negative | 1835911 - 1836624 | 25413.6 |
| glycine/d-amino acid oxidase, deaminating | PMI12_01791 | Not Available | Positive | 1836827 - 1837984 | 40978.1 |
| hypothetical protein | PMI12_01792 | Not Available | Positive | 1838030 - 1839481 | 51419.1 |
| abc-type dipeptide transport system, periplasmic component | PMI12_01793 | Not Available | Positive | 1839528 - 1841120 | 57402.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
