Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose efflux permease family protein | PMI12_01764 | Not Available | Positive | 1810157 - 1811758 | 56665.7 |
| dna-binding ferritin-like protein (oxidative damage protectant) | PMI12_01765 | Not Available | Positive | 1811804 - 1812352 | 20130.7 |
| putative hydrolase or acyltransferase of alpha/beta superfamily | PMI12_01766 | Not Available | Positive | 1812411 - 1813232 | 29753.3 |
| putative acetyltransferase | PMI12_01767 | Not Available | Positive | 1813315 - 1813632 | 11494.9 |
| hypothetical protein | PMI12_01768 | Not Available | Positive | 1813649 - 1814263 | 22917.1 |
| putative membrane protein | PMI12_01769 | Not Available | Negative | 1814254 - 1814964 | 24465.6 |
| dna-binding domain-containing protein, arac-type | PMI12_01770 | Not Available | Negative | 1815083 - 1816030 | 34801.6 |
| arabinose efflux permease family protein | PMI12_01771 | Not Available | Negative | 1816265 - 1817641 | 48807.2 |
| putative tim-barrel fold metal-dependent hydrolase | PMI12_01772 | Not Available | Positive | 1817961 - 1818944 | 37033.9 |
| protocatechuate 3,4-dioxygenase beta subunit | PMI12_01773 | Not Available | Positive | 1818970 - 1819839 | 32282.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
