Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_01694 | Not Available | Negative | 1733011 - 1733373 | 14014.5 |
| putative enzyme of the cupin superfamily | PMI12_01695 | Not Available | Positive | 1733623 - 1734015 | 14655.5 |
| abc-type dipeptide transport system, periplasmic component | PMI12_01696 | Not Available | Positive | 1734250 - 1735911 | 60448.5 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI12_01697 | Not Available | Positive | 1735938 - 1736891 | 34537.2 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI12_01698 | Not Available | Positive | 1736911 - 1737810 | 31675.6 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | PMI12_01699 | Not Available | Positive | 1737815 - 1738855 | 37542.4 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | PMI12_01700 | Not Available | Positive | 1738852 - 1739862 | 36331.4 |
| amidase, asp-trnaasn/glu-trnagln amidotransferase a subunit | PMI12_01701 | Not Available | Positive | 1739894 - 1741072 | 40987.9 |
| ureidoglycolate hydrolase | PMI12_01702 | Not Available | Negative | 1741083 - 1741598 | 18209.9 |
| hypothetical protein | PMI12_01703 | Not Available | Negative | 1742619 - 1743251 | 23712.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
