Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-phosphoglycolate phosphatase | PMI12_01674 | Not Available | Positive | 1718218 - 1718928 | 24974.9 |
| hypothetical protein | PMI12_01675 | Not Available | Negative | 1718953 - 1719558 | 21519.4 |
| anthranilate synthase component i | PMI12_01676 | Not Available | Positive | 1719908 - 1721410 | 54858.2 |
| hypothetical protein | PMI12_01677 | Not Available | Positive | 1721407 - 1721799 | 14015.0 |
| glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase | PMI12_01678 | Not Available | Positive | 1721796 - 1722380 | 21009.3 |
| threonine aldolase | PMI12_01679 | Not Available | Positive | 1722388 - 1723446 | 37265.5 |
| putative threonine efflux protein | PMI12_01680 | Not Available | Positive | 1723463 - 1724122 | 23002.7 |
| anthranilate phosphoribosyltransferase | PMI12_01681 | Not Available | Positive | 1724145 - 1725167 | 35921.7 |
| indole-3-glycerol phosphate synthase | PMI12_01682 | Not Available | Positive | 1725195 - 1725995 | 28571.5 |
| uracil-dna glycosylase | PMI12_01683 | Not Available | Positive | 1725992 - 1726699 | 25398.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
