Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion lipoprotein, vc_a0113 family | PMI12_01664 | Not Available | Positive | 1709471 - 1709983 | 18192.9 |
| hypothetical protein | PMI12_01665 | Not Available | Negative | 1710044 - 1711390 | 48610.7 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_01666 | Not Available | Positive | 1711633 - 1712328 | 24435.0 |
| rrf2 family protein, putative transcriptional regulator | PMI12_01667 | Not Available | Negative | 1712348 - 1712884 | 19261.2 |
| hypothetical protein-s-isoprenylcysteine methyltransferase | PMI12_01668 | Not Available | Negative | 1713098 - 1713559 | 16991.6 |
| short-chain dehydrogenase of unknown substrate specificity | PMI12_01669 | Not Available | Negative | 1713606 - 1714412 | 28700.0 |
| methylase involved in ubiquinone/menaquinone biosynthesis | PMI12_01670 | Not Available | Negative | 1714451 - 1715332 | 30599.5 |
| putative hydrolase or acyltransferase of alpha/beta superfamily | PMI12_01671 | Not Available | Negative | 1715398 - 1716249 | 31339.1 |
| thioredoxin reductase | PMI12_01672 | Not Available | Negative | 1716302 - 1717195 | 32125.2 |
| transcriptional regulator | PMI12_01673 | Not Available | Positive | 1717292 - 1717930 | 22967.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
