Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs element vgr protein | PMI12_01644 | Not Available | Positive | 1685804 - 1688692 | 102261.0 |
| putative low-complexity protein | PMI12_01645 | Not Available | Positive | 1688692 - 1691313 | 94756.6 |
| putative low-complexity protein | PMI12_01646 | Not Available | Positive | 1691336 - 1692385 | 38021.6 |
| protein of unknown function (duf3540) | PMI12_01647 | Not Available | Positive | 1692402 - 1693055 | 22722.2 |
| hypothetical protein | PMI12_01648 | Not Available | Positive | 1693067 - 1693462 | 13488.0 |
| rhs element vgr protein | PMI12_01649 | Not Available | Positive | 1693537 - 1695882 | 84374.1 |
| hypothetical protein | PMI12_01650 | Not Available | Positive | 1695886 - 1696359 | 16428.8 |
| hypothetical protein | PMI12_01651 | Not Available | Positive | 1696371 - 1697420 | 39046.3 |
| 3-oxoacyl-(acyl-carrier-protein) synthase | PMI12_01652 | Not Available | Positive | 1697417 - 1698481 | 36739.6 |
| hypothetical protein | PMI12_01653 | Not Available | Positive | 1698485 - 1699417 | 32685.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
