Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_01614 | Not Available | Negative | 1656754 - 1657749 | 35100.8 |
| atp-dependent chaperone clpb | PMI12_01615 | Not Available | Positive | 1657890 - 1660511 | 95750.2 |
| hypothetical protein | PMI12_01616 | Not Available | Positive | 1660518 - 1660850 | 11945.7 |
| acetyl-coa acetyltransferase | PMI12_01617 | Not Available | Positive | 1660960 - 1662144 | 40715.2 |
| protein chain release factor b | PMI12_01618 | Not Available | Positive | 1662161 - 1662568 | 15115.2 |
| hypothetical protein | PMI12_01619 | Not Available | Positive | 1662665 - 1663246 | 20604.9 |
| transcriptional regulator | PMI12_01620 | Not Available | Negative | 1663268 - 1664152 | 32556.2 |
| sulfate permease-like transporter, mfs superfamily | PMI12_01621 | Not Available | Negative | 1664166 - 1665884 | 60351.8 |
| protein of unknown function (duf2501) | PMI12_01622 | Not Available | Negative | 1666049 - 1666486 | 14764.7 |
| acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase | PMI12_01623 | Not Available | Negative | 1666575 - 1667930 | 47384.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
