Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | PMI12_01604 | Not Available | Negative | 1647843 - 1648319 | 17580.5 |
| hypothetical protein | PMI12_01605 | Not Available | Negative | 1648469 - 1648852 | 13733.3 |
| aspartate/tyrosine/aromatic aminotransferase | PMI12_01606 | Not Available | Positive | 1648975 - 1650207 | 45538.7 |
| homoserine dehydrogenase | PMI12_01607 | Not Available | Positive | 1650266 - 1651588 | 46665.8 |
| threonine synthase | PMI12_01608 | Not Available | Positive | 1651585 - 1653000 | 51634.6 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobb | PMI12_01609 | Not Available | Positive | 1653019 - 1653564 | 20158.0 |
| molybdenum cofactor synthesis domain containing protein | PMI12_01610 | Not Available | Positive | 1653608 - 1654843 | 43011.8 |
| molybdopterin converting factor, small subunit | PMI12_01611 | Not Available | Positive | 1654849 - 1655100 | 8702.48 |
| dihydrodipicolinate synthase | PMI12_01612 | Not Available | Negative | 1655087 - 1655983 | 31615.1 |
| molybdopterin converting factor, large subunit | PMI12_01613 | Not Available | Positive | 1656239 - 1656715 | 17332.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
