Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent oxidoreductase, nadph:quinone reductase | PMI12_01574 | Not Available | Negative | 1622042 - 1623028 | 34353.8 |
| 5''/3''-nucleotidase sure | PMI12_01575 | Not Available | Positive | 1623156 - 1623914 | 26973.1 |
| protein-l-isoaspartate and d-aspartate o-methyltransferase | PMI12_01576 | Not Available | Positive | 1623985 - 1624689 | 24672.4 |
| metalloendopeptidase-like membrane protein | PMI12_01577 | Not Available | Positive | 1624701 - 1625612 | 31431.2 |
| rna polymerase sigma factor, sigma-70 family | PMI12_01578 | Not Available | Positive | 1625617 - 1626666 | 38643.9 |
| 23s rrna (uracil-5-)-methyltransferase ruma | PMI12_01579 | Not Available | Positive | 1626697 - 1628145 | 53660.5 |
| ftsh-interacting integral membrane protein | PMI12_01580 | Not Available | Negative | 1628191 - 1628892 | 24770.1 |
| hypothetical protein, possibly involved in utilization of glycolate and propanediol | PMI12_01581 | Not Available | Positive | 1629058 - 1629465 | 13798.6 |
| hemin uptake protein hemp | PMI12_01582 | Not Available | Negative | 1629647 - 1629859 | 7368.04 |
| biopolymer transport protein | PMI12_01583 | Not Available | Negative | 1629953 - 1630366 | 15376.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
