Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose efflux permease family protein | PMI12_01554 | Not Available | Positive | 1602742 - 1603905 | 40518.0 |
| tigr00730 family protein | PMI12_01555 | Not Available | Negative | 1603902 - 1604765 | 32115.4 |
| translation elongation factor p | PMI12_01556 | Not Available | Negative | 1604885 - 1605439 | 20670.8 |
| pp_1857 family protein | PMI12_01557 | Not Available | Negative | 1605593 - 1606681 | 40206.1 |
| acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase | PMI12_01558 | Not Available | Positive | 1606757 - 1608181 | 51752.3 |
| gamma-glutamyltranspeptidase | PMI12_01559 | Not Available | Negative | 1608233 - 1610290 | 70377.3 |
| excinuclease abc, c subunit | PMI12_01560 | Not Available | Positive | 1610432 - 1612396 | 72348.8 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | PMI12_01561 | Not Available | Positive | 1612445 - 1613011 | 21238.8 |
| dmt(drug/metabolite transporter) superfamily permease | PMI12_01562 | Not Available | Positive | 1613008 - 1613895 | 31052.0 |
| transcriptional regulator | PMI12_01563 | Not Available | Negative | 1613914 - 1614858 | 34751.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
