Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | PMI12_01544 | Not Available | Positive | 1593848 - 1594795 | 34519.1 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_01545 | Not Available | Negative | 1594743 - 1595501 | 25788.4 |
| phasin family protein | PMI12_01546 | Not Available | Negative | 1595632 - 1596183 | 18790.1 |
| putative thioesterase | PMI12_01547 | Not Available | Positive | 1596370 - 1596813 | 16226.2 |
| hypothetical protein | PMI12_01548 | Not Available | Negative | 1596803 - 1597237 | 15785.8 |
| hypothetical protein | PMI12_01549 | Not Available | Negative | 1597279 - 1597512 | 9161.71 |
| nicotinate phosphoribosyltransferase | PMI12_01550 | Not Available | Positive | 1597691 - 1598911 | 46677.4 |
| na+/h+ antiporter nhad-like permease | PMI12_01551 | Not Available | Positive | 1598947 - 1600359 | 50099.1 |
| lactate dehydrogenase-like oxidoreductase | PMI12_01552 | Not Available | Positive | 1600371 - 1601357 | 34964.1 |
| hypothetical protein | PMI12_01553 | Not Available | Positive | 1601378 - 1602745 | 50283.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
