Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein-disulfide isomerase | PMI12_01534 | Not Available | Negative | 1580609 - 1581265 | 23585.2 |
| zn-dependent hydrolase, glyoxylase | PMI12_01535 | Not Available | Negative | 1581253 - 1582152 | 32131.9 |
| transcriptional regulator | PMI12_01536 | Not Available | Negative | 1582293 - 1583195 | 32672.7 |
| isopropylmalate/homocitrate/citramalate synthase | PMI12_01537 | Not Available | Positive | 1583296 - 1584243 | 33163.1 |
| putative acyl-coa transferase/carnitine dehydratase | PMI12_01538 | Not Available | Positive | 1584240 - 1585448 | 43363.4 |
| hypothetical protein | PMI12_01539 | Not Available | Positive | 1585490 - 1586500 | 34669.4 |
| cbs-domain-containing membrane protein | PMI12_01540 | Not Available | Negative | 1586629 - 1587756 | 40402.3 |
| drug resistance transporter, bcr/cfla subfamily | PMI12_01541 | Not Available | Negative | 1587771 - 1589006 | 44539.3 |
| rna polymerase sigma factor, sigma-70 family | PMI12_01542 | Not Available | Negative | 1589108 - 1591444 | 86519.7 |
| dna primase, catalytic core | PMI12_01543 | Not Available | Negative | 1591743 - 1593767 | 73859.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
