Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance efflux pump | PMI12_01524 | Not Available | Negative | 1570700 - 1571710 | 36204.3 |
| transcriptional regulator | PMI12_01525 | Not Available | Positive | 1571814 - 1572485 | 24143.8 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase | PMI12_01526 | Not Available | Negative | 1572463 - 1573842 | 51081.7 |
| glutathione s-transferase | PMI12_01527 | Not Available | Negative | 1573873 - 1574547 | 24920.2 |
| methionine synthase ii (cobalamin-independent) | PMI12_01528 | Not Available | Negative | 1574576 - 1575697 | 41932.1 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_01529 | Not Available | Positive | 1575975 - 1577147 | 41829.7 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_01530 | Not Available | Positive | 1577286 - 1578158 | 30872.2 |
| abc-type branched-chain amino acid transport system, permease component | PMI12_01531 | Not Available | Positive | 1578159 - 1579157 | 35249.3 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_01532 | Not Available | Positive | 1579154 - 1579915 | 27399.3 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_01533 | Not Available | Positive | 1579908 - 1580612 | 25225.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
