Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase, small subunit | PMI12_01504 | Not Available | Negative | 1546403 - 1548007 | 57974.2 |
| hypothetical protein duf81 | PMI12_01505 | Not Available | Negative | 1548182 - 1548919 | 25929.4 |
| mn2+/fe2 transporter, nramp family | PMI12_01506 | Not Available | Negative | 1548972 - 1550225 | 45336.0 |
| transcriptional regulator | PMI12_01507 | Not Available | Negative | 1550290 - 1551207 | 34106.5 |
| indolepyruvate ferredoxin oxidreductase, alpha/beta subunit | PMI12_01508 | Not Available | Positive | 1551298 - 1553457 | 77634.6 |
| 2-oxoacid:ferredoxin oxidoreductase, gamma subunit | PMI12_01509 | Not Available | Positive | 1553469 - 1555085 | 57234.8 |
| alpha-hydroxyacid dehydrogenase, fmn-dependent l-lactate dehydrogenase | PMI12_01510 | Not Available | Positive | 1555110 - 1556351 | 44563.3 |
| trap-type c4-dicarboxylate transport system, periplasmic component | PMI12_01511 | Not Available | Positive | 1556398 - 1557474 | 39201.2 |
| trap-type c4-dicarboxylate transport system, small permease component | PMI12_01512 | Not Available | Positive | 1557502 - 1558002 | 18802.1 |
| trap transporter, dctm subunit | PMI12_01513 | Not Available | Positive | 1557999 - 1559300 | 45908.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
