Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type branched-chain amino acid transport system, permease component | PMI12_01494 | Not Available | Negative | 1536322 - 1537386 | 38483.1 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_01495 | Not Available | Negative | 1537390 - 1538319 | 33019.7 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_01496 | Not Available | Negative | 1538488 - 1539321 | 30857.3 |
| amp-forming long-chain acyl-coa synthetase | PMI12_01497 | Not Available | Negative | 1539318 - 1541315 | 72808.1 |
| camp-binding protein | PMI12_01498 | Not Available | Positive | 1541358 - 1542128 | 28068.7 |
| hypothetical protein | PMI12_01499 | Not Available | Positive | 1542125 - 1542595 | 17074.3 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_01500 | Not Available | Positive | 1542655 - 1543419 | 26678.8 |
| hypothetical protein | PMI12_01501 | Not Available | Positive | 1543446 - 1543703 | 9883.78 |
| hypothetical protein | PMI12_01502 | Not Available | Negative | 1543808 - 1543911 | 3726.62 |
| xanthine dehydrogenase, molybdopterin binding subunit | PMI12_01503 | Not Available | Negative | 1543950 - 1546400 | 87854.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
