Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitate hydratase 2 | PMI12_01474 | Not Available | Positive | 1512486 - 1515071 | 92545.3 |
| hypothetical protein | PMI12_01475 | Not Available | Negative | 1515146 - 1516006 | 31882.9 |
| protein of unknown function (duf2827) | PMI12_01476 | Not Available | Negative | 1516027 - 1517163 | 42731.2 |
| hypothetical protein | PMI12_01477 | Not Available | Negative | 1517645 - 1518436 | 26610.8 |
| hypothetical protein | PMI12_01478 | Not Available | Negative | 1518581 - 1518700 | 4312.58 |
| hypothetical protein | PMI12_01479 | Not Available | Negative | 1518773 - 1519801 | 35651.1 |
| transcriptional regulator | PMI12_01480 | Not Available | Negative | 1519868 - 1520794 | 33886.0 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_01481 | Not Available | Positive | 1520873 - 1521682 | 27391.9 |
| d-xylose abc transporter, substrate-binding protein | PMI12_01482 | Not Available | Positive | 1521870 - 1522892 | 35764.1 |
| abc-type xylose transport system, permease component | PMI12_01483 | Not Available | Positive | 1522989 - 1524179 | 42088.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
